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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
14129

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRERF1 HGNC:18273 (HGNC)
55809 (Entrez Gene)
610322 (OMIM)
TRERF1 (MyGene.info)
HGNC homology
Chr6 p21.1 Chr6:42224933-42452216 (-)
GRCh38.p7
Q96PN7 (UniProt | EBI)
NM_033502 (RefSeq)
mouse Trerf1 MGI:2442086 (MGI)
224829 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr17 22.91 cM Chr17:47140942-47359458 (+)
GRCm38
224829 (NCBI Gene Model)
Q8BXJ2 (UniProt | EBI)
NM_001097623 (RefSeq)
rat Trerf1 316219 (Entrez Gene)
Chr9 q12 NP_001101669 (RefSeq)
NM_001108199 (RefSeq)
chimpanzee TRERF1 462695 (Entrez Gene)
Chr6 XP_024212978 (RefSeq)
cattle TRERF1 504797 (Entrez Gene)
Chr23 XP_005223607 (RefSeq)
dog TRERF1 608906 (Entrez Gene)
Chr12 XP_013973925 (RefSeq)
chicken TRERF1 421386 (Entrez Gene)
Chr3 XP_015139336 (RefSeq)
frog, western clawed trerf1 100491272 (Entrez Gene)
Chr5 XP_002934726 (RefSeq)
macaque, rhesus TRERF1 696006 (Entrez Gene)
Chr4 XP_014991838 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/05/2019
MGI 6.13
The Jackson Laboratory