About   Help   FAQ
HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
select all deselect all Go
human COL9A1 HGNC:2217 (HGNC)
1297 (Entrez Gene)
120210 (OMIM)
HGNC homology
Chr6 q13 Chr6:70216040-70303083 (-)
P20849 (UniProt | EBI)
NM_001851 (RefSeq)
mouse Col9a1 MGI:88465 (MGI)
12839 (Entrez Gene)
Gene Tree
HGNC homology
Chr1 9.95 cM Chr1:24177610-24252684 (+)
ENSMUSG00000026147 (Ensembl Gene Model)
ENSMUSP00000051579 (Ensembl)
ENSMUST00000054588 (Ensembl)
rat Col9a1 305104 (Entrez Gene)
Chr9 q21 P20850 (UniProt | EBI)
NM_001100842 (RefSeq)
chimpanzee COL9A1 462810 (Entrez Gene)
Chr6 XP_016811257 (RefSeq)
dog COL9A1 481873 (Entrez Gene)
Chr12 XP_022281895 (RefSeq)
chicken COL9A1 771873 (Entrez Gene)
Chr3 P12106 (UniProt | EBI)
NM_001100911 (RefSeq)
zebrafish col9a1a 100170785 (Entrez Gene)
Chr11 NP_001124096 (RefSeq)
NM_001130624 (RefSeq)
col9a1b 406548 (Entrez Gene)
Chr13 NP_998429 (RefSeq)
NM_213264 (RefSeq)
frog, western clawed col9a1 100145133 (Entrez Gene)
Chr5 XP_012818951 (RefSeq)
macaque, rhesus COL9A1 714809 (Entrez Gene)
Chr4 XP_001111519 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
MGI 6.13
The Jackson Laboratory