About   Help   FAQ
Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1391

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
select all deselect all Go
human COL6A1 HGNC:2211 (HGNC)
1291 (Entrez Gene)
120220 (OMIM)
Chr21 q22.3 Chr21:45981749-46005049 (+)
GRCh38
Bethlem Myopathy
Ullrich Congenital Muscular Dystrophy; UCMD
P12109 (UniProt | EBI)
NM_001848 (RefSeq)
mouse Col6a1 MGI:88459 (MGI)
12833 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 39.71 cM Chr10:76708792-76726168 (-)
GRCm38
Bethlem Myopathy
OTTMUSG00000020489 (VEGA)
OTTMUSP00000022317 (VEGA)
OTTMUST00000048591 (VEGA)
rat Col6a1 294337 (Entrez Gene)
Chr20 p12 XP_001079629 (RefSeq)
chimpanzee COL6A1 450204 (Entrez Gene)
Chr21 XP_001158445 (RefSeq)
rhesus macaque LOC721855 721855 (Entrez Gene)
Chr3 XP_001118050 (RefSeq)
dog COL6A1 403668 (Entrez Gene)
Chr31 XP_003434049 (RefSeq)
chicken COL6A1 396000 (Entrez Gene)
Chr7 P20785 (UniProt | EBI)
NM_205107 (RefSeq)
zebrafish col6a1 569755 (Entrez Gene)
Chr11 XP_698253 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/23/2014
MGI 5.19
The Jackson Laboratory