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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1390

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL4A2 HGNC:2203 (HGNC)
1284 (Entrez Gene)
120090 (OMIM)
Chr13 q34 Chr13:110307284-110513027 (+)
GRCh38
Hemorrhage, Intracerebral, Susceptibility To; ICH
Porencephaly 2; POREN2
P08572 (UniProt | EBI)
NM_001846 (RefSeq)
mouse Col4a2 MGI:88455 (MGI)
12827 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 5.62 cM Chr8:11312805-11449287 (+)
GRCm38
OTTMUSG00000021317 (VEGA)
OTTMUSP00000023606 (VEGA)
OTTMUST00000050538 (VEGA)
rat Col4a2 306628 (Entrez Gene)
Chr16 q12.5 XP_001076134 (RefSeq)
chimpanzee COL4A2 452661 (Entrez Gene)
Chr13 XP_001136859 (RefSeq)
rhesus macaque COL4A2 100429807 (Entrez Gene)
Chr17 XP_002800878 (RefSeq)
cattle COL4A2 508632 (Entrez Gene)
Chr12 Q7SIB3 (UniProt | EBI)
dog COL4A2 403843 (Entrez Gene)
Chr22 XP_534183 (RefSeq)
chicken COL4A2 418752 (Entrez Gene)
Chr1 NP_001155862 (RefSeq)
NM_001162390 (RefSeq)
western clawed frog col4a2 100486079 (Entrez Gene)
ChrUN XP_002933063 (RefSeq)
zebrafish col4a2 553355 (Entrez Gene)
Chr9 XP_009302768 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory