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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
13786

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SMC1B HGNC:11112 (HGNC)
27127 (Entrez Gene)
608685 (OMIM)
SMC1B (MyGene.info)
HGNC homology
Chr22 q13.31 Chr22:45344063-45413671 (-)
GRCh38.p7
Q8NDV3 (UniProt | EBI)
NM_148674 (RefSeq)
mouse Smc1b MGI:2154049 (MGI)
140557 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr15 40.25 cM Chr15:85064689-85131957 (-)
GRCm38
140557 (NCBI Gene Model)
Q920F6 (UniProt | EBI)
NM_080470 (RefSeq)
rat Smc1b 300121 (Entrez Gene)
Chr7 q34 NP_001123970 (RefSeq)
NM_001130498 (RefSeq)
chimpanzee SMC1B 458907 (Entrez Gene)
Chr22 XP_003317352 (RefSeq)
cattle SMC1B 522122 (Entrez Gene)
Chr5 XP_002688026 (RefSeq)
dog SMC1B 481207 (Entrez Gene)
Chr10 XP_022280020 (RefSeq)
chicken SMC1B 418243 (Entrez Gene)
Chr1 XP_416467 (RefSeq)
zebrafish smc1b 797354 (Entrez Gene)
Chr25 XP_009296271 (RefSeq)
frog, western clawed smc1b 100145425 (Entrez Gene)
Chr3 NP_001265278 (RefSeq)
NM_001278349 (RefSeq)
macaque, rhesus SMC1B 713486 (Entrez Gene)
Chr10 XP_001109647 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
06/30/2020
MGI 6.15
The Jackson Laboratory