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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1373

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CTSC HGNC:2528 (HGNC)
1075 (Entrez Gene)
602365 (OMIM)
Chr11 q14.2 Chr11:88293592-88337773 (-)
GRCh38
Haim-Munk Syndrome; HMS
Papillon-Lefevre Syndrome; PALS
Periodontitis, Aggressive, 1
P53634 (UniProt | EBI)
NM_001814 (RefSeq)
mouse Ctsc MGI:109553 (MGI)
13032 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 49.11 cM Chr7:88278085-88310888 (+)
GRCm38
Schizophrenia; SCZD
OTTMUSG00000031137 (VEGA)
OTTMUSP00000040719 (VEGA)
OTTMUST00000077133 (VEGA)
rat Ctsc 25423 (Entrez Gene)
Chr1 q32 P80067 (UniProt | EBI)
NM_017097 (RefSeq)
chimpanzee CTSC 451469 (Entrez Gene)
Chr11 XP_508684 (RefSeq)
rhesus macaque CTSC 705320 (Entrez Gene)
Chr14 NP_001182580 (RefSeq)
NM_001195651 (RefSeq)
cattle CTSC 352958 (Entrez Gene)
Chr29 Q3ZCJ8 (UniProt | EBI)
NM_001033617 (RefSeq)
dog CTSC 403458 (Entrez Gene)
Chr21 O97578 (UniProt | EBI)
NM_001195834 (RefSeq)
chicken CTSC 419014 (Entrez Gene)
Chr1 XP_417207 (RefSeq)
zebrafish ctsc 368704 (Entrez Gene)
Chr15 NP_999887 (RefSeq)
NM_214722 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory