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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
136368

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ABCB4 HGNC:45 (HGNC)
5244 (Entrez Gene)
171060 (OMIM)
Chr7 q21.1 Chr7:87402045-87475703 (-)
GRCh38
Cholestasis, Intrahepatic, of Pregnancy 3; ICP3
Cholestasis, Progressive Familial Intrahepatic, 3; PFIC3
Gallbladder Disease 1; GBD1
P21439 (UniProt | EBI)
NM_000443 (RefSeq)
mouse Abcb4 MGI:97569 (MGI)
18670 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 3.43 cM Chr5:8893721-8959225 (+)
GRCm38
Hepatocellular Carcinoma
ENSMUSG00000042476 (Ensembl Gene Model)
ENSMUSP00000003717 (Ensembl)
ENSMUST00000003717 (Ensembl)
rat Abcb4 24891 (Entrez Gene)
Chr4 q11-q12 Q08201 (UniProt | EBI)
NM_012690 (RefSeq)
chimpanzee ABCB4 748364 (Entrez Gene)
Chr7 XP_001160982 (RefSeq)
cattle ABCB4 100336913 (Entrez Gene)
Chr4 XP_002686763 (RefSeq)
dog ABCB4 482284 (Entrez Gene)
Chr14 XP_539403 (RefSeq)
chicken ABCB1LA 420534 (Entrez Gene)
Chr2 XP_418636 (RefSeq)
ABCB1LB 395712 (Entrez Gene)
Chr2 NP_990225 (RefSeq)
NM_204894 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory