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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
134086

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SF3B4 HGNC:10771 (HGNC)
10262 (Entrez Gene)
605593 (OMIM)
Chr1 q21.2 Chr1:149923317-149929322 (-)
GRCh38
Acrofacial Dysostosis 1, Nager Type; AFD1
Q15427 (UniProt | EBI)
NM_005850 (RefSeq)
mouse Sf3b4 MGI:109580 (MGI)
107701 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 41.65 cM Chr3:96172332-96177564 (+)
GRCm38
OTTMUSG00000021896 (VEGA)
OTTMUSP00000024556 (VEGA)
OTTMUST00000051999 (VEGA)
rat Sf3b4 295270 (Entrez Gene)
Chr2 q34 Q6AYL5 (UniProt | EBI)
NM_001011951 (RefSeq)
chimpanzee SF3B4 457265 (Entrez Gene)
Chr1 XP_009428831 (RefSeq)
rhesus macaque SF3B4 705655 (Entrez Gene)
Chr1 NP_001248161 (RefSeq)
NM_001261232 (RefSeq)
cattle SF3B4 506123 (Entrez Gene)
Chr3 NP_001192513 (RefSeq)
NM_001205584 (RefSeq)
dog SF3B4 483177 (Entrez Gene)
Chr17 XP_540295 (RefSeq)
chicken SF3B4 426042 (Entrez Gene)
Chr25 XP_423721 (RefSeq)
zebrafish sf3b4 192318 (Entrez Gene)
Chr19 NP_705947 (RefSeq)
NM_153661 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory