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Vertebrate Homology Class
Class ID
HomoloGene (Release 67, Dec 12, 2012)

MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SSX1 HGNC:11335 (HGNC)
6756 (Entrez Gene)
312820 (OMIM)
ChrX p11.23 ChrX:48255317-48267444 (+)
Sarcoma, Synovial
Q16384 (UniProt | EBI)
NM_005635 (RefSeq)
mouse Ssxb2 MGI:2446771 (MGI)
387132 (Entrez Gene)
Gene Tree
ChrX 3.83 cM ChrX:8454345-8461726 (-)
OTTMUSG00000016666 (VEGA)
OTTMUSP00000018070 (VEGA)
OTTMUST00000040443 (VEGA)
chimpanzee SSX1 736918 (Entrez Gene)
ChrX XP_001137291 (RefSeq)
cattle LOC100847469 100847469 (Entrez Gene)
ChrX XP_003588224 (RefSeq)
SSX5 767992 (Entrez Gene)
ChrX NP_001070521 (RefSeq)
NM_001077053 (RefSeq)
dog LOC612524 612524 (Entrez Gene)
ChrX XP_005641362 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 5.17
The Jackson Laboratory