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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SSX4 HGNC:11338 (HGNC)
6759 (Entrez Gene)
300326 (OMIM)
SSX4 (gene) (MyGene.info)
HGNC homology
ChrX p11.23 ChrX:48383527-48393343 (+)
O60224 (UniProt | EBI)
NM_175729 (RefSeq)
548313 (Entrez Gene)
HGNC homology
ChrX p11.23 ChrX:48402082-48411910 (-)
O60224 (UniProt | EBI)
NM_001034832 (RefSeq)
mouse Ssxb2 MGI:2446771 (MGI)
387132 (Entrez Gene)
Gene Tree
HGNC homology
ChrX 3.83 cM ChrX:8454345-8461726 (-)
OTTMUSG00000016666 (VEGA)
OTTMUSP00000018070 (VEGA)
OTTMUST00000040443 (VEGA)
cattle LOC100847469 100847469 (Entrez Gene)
ChrX XP_015325941 (RefSeq)
SSX5 767992 (Entrez Gene)
ChrX NP_001070521 (RefSeq)
NM_001077053 (RefSeq)
dog LOC612524 612524 (Entrez Gene)
ChrX XP_005641363 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.11
The Jackson Laboratory