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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1330

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CAV1 HGNC:1527 (HGNC)
857 (Entrez Gene)
601047 (OMIM)
Chr7 q31.1 Chr7:116524785-116561185 (+)
GRCh38
Lipodystrophy, Congenital Generalized, Type 3; CGL3
Partial Lipodystrophy, Congenital Cataracts, and Neurodegeneration Syndrome; LCCNS
Pulmonary Hypertension, Primary, 3; PPH3
Q03135 (UniProt | EBI)
NM_001753 (RefSeq)
mouse Cav1 MGI:102709 (MGI)
12389 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 7.73 cM Chr6:17306335-17341452 (+)
GRCm38
Alzheimer Disease; AD
Breast Cancer
OTTMUSG00000024023 (VEGA)
OTTMUSP00000028492 (VEGA)
OTTMUST00000058732 (VEGA)
rat Cav1 25404 (Entrez Gene)
Chr4 q21 P41350 (UniProt | EBI)
NM_031556 (RefSeq)
chimpanzee CAV1 463670 (Entrez Gene)
Chr7 Q2QLF2 (UniProt | EBI)
NM_001135818 (RefSeq)
rhesus macaque CAV1 704449 (Entrez Gene)
Chr3 NP_001162085 (RefSeq)
NM_001168614 (RefSeq)
cattle CAV1 281040 (Entrez Gene)
Chr4 P79132 (UniProt | EBI)
NM_174004 (RefSeq)
dog CAV1 403980 (Entrez Gene)
Chr14 P33724 (UniProt | EBI)
NM_001003296 (RefSeq)
chicken CAV1 373996 (Entrez Gene)
Chr1 P35431 (UniProt | EBI)
NM_001105664 (RefSeq)
western clawed frog cav1 548467 (Entrez Gene)
ChrUN NP_001015750 (RefSeq)
NM_001015750 (RefSeq)
zebrafish cav1 323695 (Entrez Gene)
Chr25 NP_001019333 (RefSeq)
NM_001024162 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory