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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1326

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CAPN2 HGNC:1479 (HGNC)
824 (Entrez Gene)
114230 (OMIM)
CAPN2 (MyGene.info)
HGNC homology
Chr1 q41 Chr1:223701593-223776018 (+)
GRCh38.p7
P17655 (UniProt | EBI)
NM_001748 (RefSeq)
mouse Capn2 MGI:88264 (MGI)
12334 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr1 84.93 cM Chr1:182467260-182517608 (-)
GRCm38
ENSMUSG00000026509 (Ensembl Gene Model)
ENSMUSP00000068895 (Ensembl)
ENSMUST00000068505 (Ensembl)
rat Capn2 29154 (Entrez Gene)
Chr13 q26 Q07009 (UniProt | EBI)
NM_017116 (RefSeq)
chimpanzee CAPN2 457765 (Entrez Gene)
Chr1 XP_003308813 (RefSeq)
cattle CAPN2 281662 (Entrez Gene)
Chr16 Q27971 (UniProt | EBI)
NM_001103086 (RefSeq)
dog CAPN2 480118 (Entrez Gene)
Chr7 XP_005622713 (RefSeq)
chicken CAPN2 395963 (Entrez Gene)
Chr3 Q92178 (UniProt | EBI)
NM_205080 (RefSeq)
zebrafish capn2l 550505 (Entrez Gene)
Chr22
capn2l 445091 (Entrez Gene)
Chr22 NP_001003485 (RefSeq)
NM_001003485 (RefSeq)
frog, western clawed capn2 448035 (Entrez Gene)
Chr5 NP_001005446 (RefSeq)
NM_001005446 (RefSeq)
macaque, rhesus CAPN2 703047 (Entrez Gene)
Chr1 NP_001247596 (RefSeq)
NM_001260667 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
05/19/2020
MGI 6.15
The Jackson Laboratory