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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
13240

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CCDC102A HGNC:28097 (HGNC)
92922 (Entrez Gene)
HGNC homology
Chr16 q21 Chr16:57512178-57538305 (-)
GRCh38.p7
Q96A19 (UniProt | EBI)
NM_033212 (RefSeq)
mouse Ccdc102a MGI:2686927 (MGI)
234582 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr8 46.99 cM Chr8:94902869-94918098 (-)
GRCm38
234582 (NCBI Gene Model)
Q3TMW1 (UniProt | EBI)
NM_001033533 (RefSeq)
rat Ccdc102a 361363 (Entrez Gene)
Chr19 p13 NP_001101907 (RefSeq)
NM_001108437 (RefSeq)
cattle CCDC102A 513086 (Entrez Gene)
Chr18 A0JNH6 (UniProt | EBI)
NM_001077915 (RefSeq)
dog CCDC102A 487263 (Entrez Gene)
Chr2 XP_022270506 (RefSeq)
chicken CCDC102A 427528 (Entrez Gene)
Chr11 XP_025010029 (RefSeq)
zebrafish ccdc102a 325319 (Entrez Gene)
Chr7 Q6NZW0 (UniProt | EBI)
NM_205552 (RefSeq)
frog, western clawed ccdc102a 100124933 (Entrez Gene)
Chr4 NP_001096344 (RefSeq)
NM_001102874 (RefSeq)
macaque, rhesus CCDC102A 704988 (Entrez Gene)
Chr20 XP_014981736 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/21/2020
MGI 6.14
The Jackson Laboratory