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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
13237

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human OPALIN HGNC:20707 (HGNC)
93377 (Entrez Gene)
617200 (OMIM)
TMEM10 (MyGene.info)
HGNC homology
Chr10 q24.1 Chr10:96343216-96359365 (-)
GRCh38.p7
Q96PE5 (UniProt | EBI)
NM_001284320 (RefSeq)
mouse Opalin MGI:2657025 (MGI)
226115 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr19 34.36 cM Chr19:41061959-41077113 (-)
GRCm38
226115 (NCBI Gene Model)
Q7M750 (UniProt | EBI)
NM_153520 (RefSeq)
rat Opalin 361757 (Entrez Gene)
Chr1 q54 NP_001017386 (RefSeq)
NM_001017386 (RefSeq)
chimpanzee OPALIN 450643 (Entrez Gene)
Chr10 NP_001238889 (RefSeq)
NM_001251961 (RefSeq)
cattle OPALIN 616443 (Entrez Gene)
Chr26 Q5E9I3 (UniProt | EBI)
NM_001076423 (RefSeq)
dog OPALIN 608634 (Entrez Gene)
Chr28 XP_850811 (RefSeq)
macaque, rhesus OPALIN 704725 (Entrez Gene)
Chr9 XP_015003323 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
07/29/2020
MGI 6.15
The Jackson Laboratory