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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
13227

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SEC16B HGNC:30301 (HGNC)
89866 (Entrez Gene)
612855 (OMIM)
SEC16B (MyGene.info)
HGNC homology
Chr1 q25.2 Chr1:177929107-177969915 (-)
GRCh38.p7
Q96JE7 (UniProt | EBI)
NM_001356500 (RefSeq)
mouse Sec16b MGI:2148802 (MGI)
89867 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr1 68.0 cM Chr1:157506733-157568425 (+)
GRCm38
89867 (NCBI Gene Model)
Q91XT4 (UniProt | EBI)
NM_033354 (RefSeq)
rat Sec16b 89868 (Entrez Gene)
Chr13 q22 Q75N33 (UniProt | EBI)
NM_053571 (RefSeq)
chimpanzee SEC16B 457545 (Entrez Gene)
Chr1 XP_016788675 (RefSeq)
cattle SEC16B 404548 (Entrez Gene)
Chr16 Q75NY9 (UniProt | EBI)
NM_206971 (RefSeq)
dog SEC16B 490329 (Entrez Gene)
Chr7 XP_038462501 (RefSeq)
chicken SEC16B 424431 (Entrez Gene)
Chr8 Q6AW68 (UniProt | EBI)
NM_001031269 (RefSeq)
frog, western clawed sec16b 100488357 (Entrez Gene)
Chr4 XP_031756827 (RefSeq)
macaque, rhesus SEC16B 709635 (Entrez Gene)
Chr1 XP_014978603 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
04/06/2021
MGI 6.16
The Jackson Laboratory