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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
13215

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CDHR1 HGNC:14550 (HGNC)
92211 (Entrez Gene)
609502 (OMIM)
HGNC homology
Chr10 q23.1 Chr10:84194635-84219621 (+)
GRCh38.p7
cone-rod dystrophy 15
Q96JP9 (UniProt | EBI)
NM_033100 (RefSeq)
mouse Cdhr1 MGI:2157782 (MGI)
170677 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr14 21.29 cM Chr14:37077849-37098311 (-)
GRCm38
170677 (NCBI Gene Model)
Q8VHP6 (UniProt | EBI)
NM_130878 (RefSeq)
rat Cdhr1 93662 (Entrez Gene)
Chr16 p14 Q91XU7 (UniProt | EBI)
NM_053572 (RefSeq)
chimpanzee CDHR1 450564 (Entrez Gene)
Chr10 XP_009457103 (RefSeq)
cattle CDHR1 281996 (Entrez Gene)
Chr28 Q8WN91 (UniProt | EBI)
NM_174823 (RefSeq)
dog CDHR1 610781 (Entrez Gene)
Chr4 XP_853425 (RefSeq)
chicken CDHR1 414847 (Entrez Gene)
Chr6 Q8UVJ7 (UniProt | EBI)
NM_001001759 (RefSeq)
zebrafish cdhr1a 449008 (Entrez Gene)
Chr13 Q6B3P0 (UniProt | EBI)
NM_001005402 (RefSeq)
frog, western clawed cdhr1 100496998 (Entrez Gene)
Chr7 XP_017951141 (RefSeq)
macaque, rhesus CDHR1 698637 (Entrez Gene)
Chr9 XP_028709385 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/06/2019
MGI 6.14
The Jackson Laboratory