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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
13167

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SMIM3 HGNC:30248 (HGNC)
85027 (Entrez Gene)
608324 (OMIM)
Chr5 q33.1 Chr5:150777946-150796736 (+)
GRCh38
Q9BZL3 (UniProt | EBI)
NM_032947 (RefSeq)
mouse Smim3 MGI:1917088 (MGI)
106878 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 34.36 cM Chr18:60474193-60501983 (-)
GRCm38
Chromosome 5q Deletion Syndrome
ENSMUSG00000038059 (Ensembl Gene Model)
ENSMUSP00000039285 (Ensembl)
ENSMUST00000042710 (Ensembl)
rat Smim3 286910 (Entrez Gene)
Chr18 q12.1 Q99PE6 (UniProt | EBI)
NM_173126 (RefSeq)
chimpanzee SMIM3 462196 (Entrez Gene)
Chr5 XP_003950704 (RefSeq)
cattle MGC128424 767924 (Entrez Gene)
Chr7 NP_001231048 (RefSeq)
NM_001244119 (RefSeq)
dog SMIM3 100684301 (Entrez Gene)
Chr4 XP_005619337 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory