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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1313

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human C1R HGNC:1246 (HGNC)
715 (Entrez Gene)
613785 (OMIM)
Chr12 p13 Complement Component C1r/C1s Deficiency
P00736 (UniProt | EBI)
NM_001733 (RefSeq)
mouse C1ra MGI:1355313 (MGI)
50909 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 59.16 cM Chr6:124512632-124523440 (+)
GRCm38
ENSMUSG00000055172 (Ensembl Gene Model)
ENSMUSP00000063707 (Ensembl)
ENSMUST00000068593 (Ensembl)
C1rb MGI:3779804 (MGI)
667277 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 59.17 cM Chr6:124570294-124581171 (+)
GRCm38
OTTMUSG00000044915 (VEGA)
OTTMUSP00000065944 (VEGA)
OTTMUST00000118064 (VEGA)
rat C1r 312705 (Entrez Gene)
Chr4 q42 NP_001128027 (RefSeq)
NM_001134555 (RefSeq)
chimpanzee C1R 466939 (Entrez Gene)
Chr12 Q5R1W3 (UniProt | EBI)
NM_001034120 (RefSeq)
dog C1R 477707 (Entrez Gene)
Chr27 XP_534901 (RefSeq)
chicken C1R 418295 (Entrez Gene)
Chr1 XP_416518 (RefSeq)
western clawed frog LOC100485749 100485749 (Entrez Gene)
ChrUN XP_002941260 (RefSeq)
LOC100498646 100498646 (Entrez Gene)
ChrUN XP_002941255 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory