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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
130366

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SNRPF HGNC:11162 (HGNC)
6636 (Entrez Gene)
603541 (OMIM)
HGNC homology
Chr12 q23.1 Chr12:95858931-95866460 (+)
GRCh38.p7
P62306 (UniProt | EBI)
NM_003095 (RefSeq)
mouse Snrpf MGI:1917128 (MGI)
69878 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr10 48.57 cM Chr10:93583029-93589658 (-)
GRCm38
69878 (NCBI Gene Model)
P62307 (UniProt | EBI)
NM_027246 (RefSeq)
rat Snrpf 680737 (Entrez Gene)
Chr7 q13 NP_001119563 (RefSeq)
NM_001126091 (RefSeq)
chimpanzee SNRPF 452143 (Entrez Gene)
Chr12 XP_009424311 (RefSeq)
cattle SNRPF 615240 (Entrez Gene)
Chr5 Q3T0Z8 (UniProt | EBI)
NM_001195027 (RefSeq)
dog SNRPF 482609 (Entrez Gene)
Chr15 XP_022283392 (RefSeq)
chicken SNRPF 417916 (Entrez Gene)
Chr1 NP_001264291 (RefSeq)
NM_001277362 (RefSeq)
zebrafish snrpf 445404 (Entrez Gene)
Chr7 NP_001003881 (RefSeq)
NM_001003881 (RefSeq)
frog, western clawed snrpf 448659 (Entrez Gene)
Chr3 NP_001005083 (RefSeq)
NM_001005083 (RefSeq)
macaque, rhesus SNRPF 716917 (Entrez Gene)
Chr11 XP_015007954 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory