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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
13019

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HPS3 HGNC:15597 (HGNC)
84343 (Entrez Gene)
606118 (OMIM)
Chr3 q24 Chr3:149129584-149173518 (+)
GRCh38
Hermansky-Pudlak Syndrome 3; HPS3
Q969F9 (UniProt | EBI)
NM_032383 (RefSeq)
mouse Hps3 MGI:2153839 (MGI)
12807 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 6.12 cM Chr3:19995945-20035315 (-)
GRCm38
Hermansky-Pudlak Syndrome 3; HPS3
Storage Pool Platelet Disease
OTTMUSG00000023502 (VEGA)
OTTMUSP00000027592 (VEGA)
OTTMUST00000057229 (VEGA)
rat Hps3 310288 (Entrez Gene)
Chr2 q24 NP_001101134 (RefSeq)
NM_001107664 (RefSeq)
chimpanzee HPS3 460767 (Entrez Gene)
Chr3 XP_001139589 (RefSeq)
rhesus macaque HPS3 712282 (Entrez Gene)
Chr2 XP_002803056 (RefSeq)
cattle HPS3 783104 (Entrez Gene)
Chr1 NP_001178106 (RefSeq)
NM_001191177 (RefSeq)
dog HPS3 485709 (Entrez Gene)
Chr23 XP_542830 (RefSeq)
chicken HPS3 425047 (Entrez Gene)
Chr9 XP_422849 (RefSeq)
zebrafish hps3 777758 (Entrez Gene)
Chr22 NP_001180471 (RefSeq)
NM_001077799 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory