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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
130030

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PGBD1 HGNC:19398 (HGNC)
84547 (Entrez Gene)
HGNC homology
Chr6 p22.1 Chr6:28281537-28303681 (+)
GRCh38.p7
Q96JS3 (UniProt | EBI)
NM_001184743 (RefSeq)
mouse Pgbd1 MGI:2441675 (MGI)
319207 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr13 7.79 cM Chr13:21421275-21441058 (-)
GRCm38
ENSMUSG00000055313 (Ensembl Gene Model)
ENSMUSP00000097307 (Ensembl)
ENSMUST00000099719 (Ensembl)
chimpanzee PGBD1 462517 (Entrez Gene)
Chr6 NP_001230826 (RefSeq)
NM_001243897 (RefSeq)
dog PGBD1 102154280 (Entrez Gene)
Chr35 XP_022270287 (RefSeq)
macaque, rhesus PGBD1 707252 (Entrez Gene)
Chr4 XP_001099438 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/12/2019
MGI 6.14
The Jackson Laboratory