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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
128606

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CXCL12 HGNC:10672 (HGNC)
6387 (Entrez Gene)
600835 (OMIM)
Chr10 q11.1 Chr10:44370153-44385097 (-)
GRCh38
Human Immunodeficiency Virus Type 1, Susceptibility to
P48061 (UniProt | EBI)
NM_000609 (RefSeq)
mouse Cxcl12 MGI:103556 (MGI)
20315 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 54.81 cM Chr6:117168535-117181367 (+)
GRCm38
OTTMUSG00000022768 (VEGA)
OTTMUSP00000026114 (VEGA)
OTTMUST00000054664 (VEGA)
rat Cxcl12 24772 (Entrez Gene)
Chr4 q42.1 NP_001029054 (RefSeq)
NM_022177 (RefSeq)
chimpanzee LOC741624 741624 (Entrez Gene)
Chr10 XP_001157443 (RefSeq)
rhesus macaque CXCL12 574334 (Entrez Gene)
Chr9 NP_001028106 (RefSeq)
NM_001032934 (RefSeq)
cattle CXCL12 613811 (Entrez Gene)
Chr28 NP_001106645 (RefSeq)
NM_001113174 (RefSeq)
dog CXCL12 449622 (Entrez Gene)
Chr28 NP_001121569 (RefSeq)
NM_001128097 (RefSeq)
chicken CXCL12 395180 (Entrez Gene)
Chr6 NP_989841 (RefSeq)
NM_204510 (RefSeq)
western clawed frog cxcl12 548481 (Entrez Gene)
ChrUN Q5EBF6 (UniProt | EBI)
NM_001015764 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory