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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CXCL12 HGNC:10672 (HGNC)
6387 (Entrez Gene)
600835 (OMIM)
Stromal cell-derived factor-1 (MyGene.info)
HGNC homology
Chr10 q11.21 Chr10:44292088-44385097 (-)
acquired immunodeficiency syndrome
P48061 (UniProt | EBI)
NM_001178134 (RefSeq)
mouse Cxcl12 MGI:103556 (MGI)
20315 (Entrez Gene)
Gene Tree
HGNC homology
Chr6 54.81 cM Chr6:117168535-117181367 (+)
OTTMUSG00000022768 (VEGA)
OTTMUSP00000026114 (VEGA)
OTTMUST00000054664 (VEGA)
rat Cxcl12 24772 (Entrez Gene)
Chr4 q42 NP_071513 (RefSeq)
NM_022177 (RefSeq)
chimpanzee CXCL12 741624 (Entrez Gene)
Chr10 XP_016773648 (RefSeq)
cattle CXCL12 613811 (Entrez Gene)
Chr28 NP_001106645 (RefSeq)
NM_001113174 (RefSeq)
dog CXCL12 449622 (Entrez Gene)
Chr28 NP_001295390 (RefSeq)
NM_001128097 (RefSeq)
chicken CXCL12 395180 (Entrez Gene)
Chr6 NP_989841 (RefSeq)
NM_204510 (RefSeq)
frog, western clawed cxcl12 548481 (Entrez Gene)
Chr7 Q5EBF6 (UniProt | EBI)
NM_001015764 (RefSeq)
macaque, rhesus CXCL12 574334 (Entrez Gene)
Chr9 NP_001028106 (RefSeq)
NM_001032934 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory