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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
128432

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TPI1 HGNC:12009 (HGNC)
7167 (Entrez Gene)
190450 (OMIM)
Chr12 p13 Chr12:6867420-6870946 (+)
GRCh38
Triosephosphate Isomerase Deficiency; TPID
P60174 (UniProt | EBI)
NM_000365 (RefSeq)
mouse Tpi1 MGI:98797 (MGI)
21991 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 59.17 cM Chr6:124810586-124814296 (-)
GRCm38
OTTMUSG00000017534 (VEGA)
OTTMUSP00000019147 (VEGA)
OTTMUST00000042601 (VEGA)
rat LOC100911515 100911515 (Entrez Gene)
Chr9 XP_003750702 (RefSeq)
chimpanzee TPI1 451799 (Entrez Gene)
Chr12 P60175 (UniProt | EBI)
NM_001071782 (RefSeq)
rhesus macaque TPI1 706960 (Entrez Gene)
ChrX XP_001101998 (RefSeq)
cattle TPI1 281543 (Entrez Gene)
Chr5 Q5E956 (UniProt | EBI)
NM_001013589 (RefSeq)
dog TPI1 477711 (Entrez Gene)
Chr27 P54714 (UniProt | EBI)
NM_001197054 (RefSeq)
chicken TPI1 396435 (Entrez Gene)
Chr1 P00940 (UniProt | EBI)
NM_205451 (RefSeq)
western clawed frog tpi1 100038162 (Entrez Gene)
ChrUN B0BM40 (UniProt | EBI)
NM_001114234 (RefSeq)
zebrafish tpi1a 192309 (Entrez Gene)
Chr19 Q1MTI4 (UniProt | EBI)
NM_153667 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory