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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HMGA1 HGNC:5010 (HGNC)
3159 (Entrez Gene)
600701 (OMIM)
HMGA1 (MyGene.info)
HGNC homology
Chr6 p21.31 Chr6:34236800-34246231 (+)
type 2 diabetes mellitus
P17096 (UniProt | EBI)
NM_001319078 (RefSeq)
mouse Hmga1 MGI:96160 (MGI)
15361 (Entrez Gene)
Gene Tree
HGNC homology
Chr17 14.5 cM Chr17:27556620-27563674 (+)
type 2 diabetes mellitus
OTTMUSG00000028935 (VEGA)
OTTMUSP00000036805 (VEGA)
OTTMUST00000071708 (VEGA)
Hmga1b MGI:96161 (MGI)
111241 (Entrez Gene)
Gene Tree
Chr11 84.51 cM Chr11:120762794-120764419 (+)
OTTMUSG00000004118 (VEGA)
OTTMUSP00000004524 (VEGA)
OTTMUST00000009297 (VEGA)
rat Hmga1 117062 (Entrez Gene)
Chr20 p12 Q8K585 (UniProt | EBI)
NM_139327 (RefSeq)
chimpanzee HMGA1 746594 (Entrez Gene)
Chr6 NP_001233425 (RefSeq)
NM_001246496 (RefSeq)
dog HMGA1 442946 (Entrez Gene)
Chr12 Q6URC2 (UniProt | EBI)
NM_001003387 (RefSeq)
chicken HMGA1 378795 (Entrez Gene)
Chr26 NP_989700 (RefSeq)
NM_204369 (RefSeq)
macaque, rhesus LOC720502 720502 (Entrez Gene)
Chr4 XP_002806007 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.11
The Jackson Laboratory