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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
128184

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HLA-B HGNC:4932 (HGNC)
3106 (Entrez Gene)
142830 (OMIM)
Chr6 p21.3 Chr6:31353872-31357212 (-)
GRCh38
Major Histocompatibility Complex, Class I, B; HLA-B
Severe Cutaneous Adverse Reaction, Susceptibility to
Spondyloarthropathy, Susceptibility to, 1; SPDA1
P01889 (UniProt | EBI)
NM_005514 (RefSeq)
mouse Gm8909 MGI:3704134 (MGI)
667977 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 18.97 cM Chr17:36164443-36168537 (-)
GRCm38
OTTMUSG00000037026 (VEGA)
OTTMUSP00000053121 (VEGA)
OTTMUST00000095222 (VEGA)
Gm10499 MGI:3702919 (MGI)
69717 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 18.95 cM Chr17:36141758-36145923 (-)
GRCm38
OTTMUSG00000037348 (VEGA)
XP_006544859 (RefSeq)
OTTMUST00000096360 (VEGA)
H2-Bl MGI:892004 (MGI)
14963 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 18.89 cM Chr17:36080115-36084223 (-)
GRCm38
OTTMUSG00000037291 (VEGA)
OTTMUSP00000053727 (VEGA)
OTTMUST00000096210 (VEGA)
H2-D1 MGI:95896 (MGI)
14964 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 18.61 cM Chr17:35262730-35267499 (+)
GRCm38
OTTMUSG00000037094 (VEGA)
OTTMUSP00000053284 (VEGA)
OTTMUST00000095494 (VEGA)
H2-K1 MGI:95904 (MGI)
14972 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 17.98 cM Chr17:33996017-34000333 (-)
GRCm38
OTTMUSG00000037104 (VEGA)
OTTMUSP00000053302 (VEGA)
OTTMUST00000095521 (VEGA)
H2-Q1 MGI:95928 (MGI)
15006 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 18.63 cM Chr17:35320405-35325099 (+)
GRCm38
OTTMUSG00000037097 (VEGA)
OTTMUSP00000053287 (VEGA)
OTTMUST00000095502 (VEGA)
H2-Q2 MGI:95931 (MGI)
15013 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 18.64 cM Chr17:35342242-35346762 (+)
GRCm38
OTTMUSG00000037101 (VEGA)
OTTMUSP00000053292 (VEGA)
OTTMUST00000095510 (VEGA)
H2-Q4 MGI:95933 (MGI)
15015 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 18.65 cM Chr17:35379617-35385290 (+)
GRCm38
OTTMUSG00000037138 (VEGA)
OTTMUSP00000053359 (VEGA)
OTTMUST00000095617 (VEGA)
H2-Q6 MGI:95935 (MGI)
110557 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 18.66 cM Chr17:35424850-35430055 (+)
GRCm38
OTTMUSG00000037190 (VEGA)
OTTMUSP00000053519 (VEGA)
OTTMUST00000095868 (VEGA)
H2-Q7 MGI:95936 (MGI)
15018 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 18.67 cM Chr17:35439155-35443769 (+)
GRCm38
OTTMUSG00000037191 (VEGA)
OTTMUSP00000053520 (VEGA)
OTTMUST00000095869 (VEGA)
rat RT1-A1 24973 (Entrez Gene)
Chr20 p12 NP_001008827 (RefSeq)
NM_001008827 (RefSeq)
RT1-A2 24974 (Entrez Gene)
Chr20 p12 NP_001008829 (RefSeq)
NM_001008829 (RefSeq)
RT1-A3 309627 (Entrez Gene)
Chr20 p12 NP_001008830 (RefSeq)
NM_001008830 (RefSeq)
RT1-CE1 309603 (Entrez Gene)
Chr20 p12 NP_001008832 (RefSeq)
NM_001008832 (RefSeq)
RT1-CE2 414779 (Entrez Gene)
Chr20 p12 NP_001008840 (RefSeq)
NM_001008840 (RefSeq)
RT1-CE3 414793 (Entrez Gene)
Chr20 p12 NP_001008841 (RefSeq)
NM_001008841 (RefSeq)
RT1-CE4 414783 (Entrez Gene)
Chr20 p12 NP_001008842 (RefSeq)
NM_001008842 (RefSeq)
RT1-CE5 309607 (Entrez Gene)
Chr20 p12 NP_001008843 (RefSeq)
NM_001008843 (RefSeq)
RT1-CE7 368153 (Entrez Gene)
Chr20 p12 NP_001008845 (RefSeq)
NM_001008845 (RefSeq)
RT1-CE10 414792 (Entrez Gene)
Chr20 p12 NP_001008833 (RefSeq)
NM_001008833 (RefSeq)
RT1-CE11 414791 (Entrez Gene)
Chr20 p12 NP_001008834 (RefSeq)
NM_001008834 (RefSeq)
RT1-CE12 309600 (Entrez Gene)
Chr20 p12 NP_001008835 (RefSeq)
NM_001008835 (RefSeq)
RT1-CE13 414790 (Entrez Gene)
Chr20 p12 NP_001008836 (RefSeq)
NM_001008836 (RefSeq)
RT1-CE15 414789 (Entrez Gene)
Chr20 p12 NP_001008838 (RefSeq)
NM_001008838 (RefSeq)
RT1-CE16 414819 (Entrez Gene)
Chr20 NP_001008839 (RefSeq)
NM_001008839 (RefSeq)
RT1-Cl 24977 (Entrez Gene)
Chr20 NP_996730 (RefSeq)
NM_206848 (RefSeq)
chimpanzee PATR-B 450202 (Entrez Gene)
Chr6 P13751 (UniProt | EBI)
NM_001009081 (RefSeq)
rhesus macaque LOC714964 714964 (Entrez Gene)
Chr4 XP_002803714 (RefSeq)
LOC720330 720330 (Entrez Gene)
Chr4 XP_002804028 (RefSeq)
LOC720365 720365 (Entrez Gene)
Chr4 XP_002804029 (RefSeq)
LOC100424348 100424348 (Entrez Gene)
Chr4 XP_002804027 (RefSeq)
MAMU-B 700391 (Entrez Gene)
Chr4 NP_001041710 (RefSeq)
NM_001048245 (RefSeq)
MAMU-B18 100141394 (Entrez Gene)
Chr4 NP_001108436 (RefSeq)
NM_001114964 (RefSeq)
MAMU-I 720372 (Entrez Gene)
Chr4 NP_001073139 (RefSeq)
NM_001079671 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory