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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
12797

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SNX27 HGNC:20073 (HGNC)
81609 (Entrez Gene)
611541 (OMIM)
SNX27 (MyGene.info)
HGNC homology
Chr1 q21.3 Chr1:151612027-151699083 (+)
GRCh38.p7
Q96L92 (UniProt | EBI)
NM_030918 (RefSeq)
mouse Snx27 MGI:1923992 (MGI)
76742 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr3 40.74 cM Chr3:94497544-94582716 (-)
GRCm38
OTTMUSG00000019563 (VEGA)
OTTMUSP00000021102 (VEGA)
OTTMUST00000046711 (VEGA)
rat Snx27 260323 (Entrez Gene)
Chr2 q34 Q8K4V4 (UniProt | EBI)
NM_152847 (RefSeq)
chimpanzee SNX27 457299 (Entrez Gene)
Chr1 XP_001172517 (RefSeq)
cattle SNX27 513214 (Entrez Gene)
Chr3 A5PKA5 (UniProt | EBI)
NM_001098956 (RefSeq)
dog SNX27 483200 (Entrez Gene)
Chr17 XP_022260709 (RefSeq)
chicken SNX27 425666 (Entrez Gene)
Chr25 NP_001026517 (RefSeq)
NM_001031346 (RefSeq)
zebrafish snx27a 566205 (Entrez Gene)
Chr19 NP_001038565 (RefSeq)
NM_001045100 (RefSeq)
snx27b 393512 (Entrez Gene)
Chr16 NP_956834 (RefSeq)
NM_200540 (RefSeq)
macaque, rhesus SNX27 710990 (Entrez Gene)
Chr1 XP_015007668 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/14/2017
MGI 6.11
The Jackson Laboratory