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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
12745

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC38A1 HGNC:13447 (HGNC)
81539 (Entrez Gene)
608490 (OMIM)
SLC38A1 (MyGene.info)
HGNC homology
Chr12 q13.11 Chr12:46183055-46269425 (-)
GRCh38.p7
Q9H2H9 (UniProt | EBI)
NM_030674 (RefSeq)
mouse Slc38a1 MGI:2145895 (MGI)
105727 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr15 52.53 cM Chr15:96571418-96642913 (-)
GRCm38
ENSMUSG00000023169 (Ensembl Gene Model)
ENSMUSP00000085801 (Ensembl)
ENSMUST00000088454 (Ensembl)
rat Slc38a1 170567 (Entrez Gene)
Chr7 q35 Q9JM15 (UniProt | EBI)
NM_138832 (RefSeq)
chimpanzee SLC38A1 451850 (Entrez Gene)
Chr12 XP_016779062 (RefSeq)
cattle SLC38A1 527491 (Entrez Gene)
Chr5 XP_002687367 (RefSeq)
dog SLC38A1 477633 (Entrez Gene)
Chr27 XP_038433360 (RefSeq)
chicken SLC38A1 417806 (Entrez Gene)
Chr1 NP_001186532 (RefSeq)
NM_001199603 (RefSeq)
frog, western clawed slc38a1 100486368 (Entrez Gene)
Chr3 XP_031754814 (RefSeq)
macaque, rhesus SLC38A1 702135 (Entrez Gene)
Chr11 NP_001253027 (RefSeq)
NM_001266098 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
02/16/2021
MGI 6.16
The Jackson Laboratory