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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
12744

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LIM2 HGNC:6610 (HGNC)
3982 (Entrez Gene)
154045 (OMIM)
Chr19 q13.4 Chr19:51379909-51387956 (-)
GRCh38
Cataract 19; CTRCT19
P55344 (UniProt | EBI)
NM_030657 (RefSeq)
mouse Lim2 MGI:104698 (MGI)
233187 (Entrez Gene)
VISTA-Point
Chr7 28.25 cM Chr7:43430101-43435991 (+)
GRCm38
Cataract 19; CTRCT19
233187 (NCBI Gene Model)
H3BKT1 (UniProt | EBI)
NM_177693 (RefSeq)
rat Lim2 114903 (Entrez Gene)
Chr1 q22 P54825 (UniProt | EBI)
NM_053771 (RefSeq)
chimpanzee LIM2 748793 (Entrez Gene)
Chr19 XP_001174186 (RefSeq)
rhesus macaque LIM2 719639 (Entrez Gene)
Chr19 XP_001116341 (RefSeq)
cattle LIM2 281282 (Entrez Gene)
Chr18 P20274 (UniProt | EBI)
NM_174102 (RefSeq)
dog LIM2 100856095 (Entrez Gene)
Chr1 XP_003638853 (RefSeq)
western clawed frog lim2 100124809 (Entrez Gene)
ChrUN NP_001096249 (RefSeq)
NM_001102779 (RefSeq)
zebrafish lim2.5 541395 (Entrez Gene)
Chr16 NP_001013540 (RefSeq)
NM_001013522 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory