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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
12725

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GLI2 HGNC:4318 (HGNC)
2736 (Entrez Gene)
165230 (OMIM)
Chr2 q14 Chr2:120797291-120992653 (+)
GRCh38
Holoprosencephaly 9; HPE9
Pallister-Hall Syndrome 2; PHS2
P10070 (UniProt | EBI)
NM_005270 (RefSeq)
mouse Gli2 MGI:95728 (MGI)
14633 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 52.17 cM Chr1:118834132-119053619 (-)
GRCm38
OTTMUSG00000034815 (VEGA)
OTTMUSP00000048224 (VEGA)
OTTMUST00000088493 (VEGA)
rat Gli2 304729 (Entrez Gene)
Chr13 q11 NP_001100639 (RefSeq)
NM_001107169 (RefSeq)
chimpanzee GLI2 459582 (Entrez Gene)
Chr2B XP_001158280 (RefSeq)
rhesus macaque LOC705877 705877 (Entrez Gene)
Chr13 XP_002808099 (RefSeq)
cattle GLI2 510255 (Entrez Gene)
Chr2 NP_001179179 (RefSeq)
NM_001192250 (RefSeq)
dog GLI2 100682984 (Entrez Gene)
Chr19 XP_003432520 (RefSeq)
chicken GLI2 395956 (Entrez Gene)
Chr7 P55879 (UniProt | EBI)
NM_001098851 (RefSeq)
western clawed frog LOC100498653 100498653 (Entrez Gene)
ChrUN XP_002943329 (RefSeq)
zebrafish gli2a 30154 (Entrez Gene)
Chr9 NP_571042 (RefSeq)
NM_130967 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory