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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LRRC42 HGNC:28792 (HGNC)
115353 (Entrez Gene)
HGNC homology
Chr1 p32.3 Chr1:53946077-53968168 (+)
Q9Y546 (UniProt | EBI)
NM_052940 (RefSeq)
mouse Lrrc42 MGI:1925059 (MGI)
77809 (Entrez Gene)
Gene Tree
HGNC homology
Chr4 50.18 cM Chr4:107233514-107253532 (-)
ENSMUSG00000028617 (Ensembl Gene Model)
ENSMUSP00000030360 (Ensembl)
ENSMUST00000030360 (Ensembl)
rat Lrrc42 298309 (Entrez Gene)
Chr5 q34 Q4KM95 (UniProt | EBI)
NM_001025653 (RefSeq)
chimpanzee LRRC42 456869 (Entrez Gene)
Chr1 XP_009456494 (RefSeq)
cattle LRRC42 534728 (Entrez Gene)
Chr3 Q2HJ90 (UniProt | EBI)
NM_001046386 (RefSeq)
dog LRRC42 489580 (Entrez Gene)
Chr5 XP_546700 (RefSeq)
chicken LRRC42 424655 (Entrez Gene)
Chr8 XP_422489 (RefSeq)
zebrafish lrrc42 326793 (Entrez Gene)
Chr2 Q6P5J6 (UniProt | EBI)
NM_199747 (RefSeq)
frog, western clawed lrrc42 779456 (Entrez Gene)
Chr4 Q0V9Y8 (UniProt | EBI)
NM_001276688 (RefSeq)
macaque, rhesus LRRC42 714839 (Entrez Gene)
Chr1 XP_001113087 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.13
The Jackson Laboratory