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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
12640

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SUN5 HGNC:16252 (HGNC)
140732 (Entrez Gene)
613942 (OMIM)
SPAG4L (MyGene.info)
HGNC homology
Chr20 q11.21 Chr20:32983773-33004449 (-)
GRCh38.p7
spermatogenic failure 16
Q8TC36 (UniProt | EBI)
NM_080675 (RefSeq)
mouse Sun5 MGI:1923657 (MGI)
76407 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr2 75.99 cM Chr2:153856188-153871084 (-)
GRCm38
ENSMUSG00000027480 (Ensembl Gene Model)
ENSMUSP00000028982 (Ensembl)
ENSMUST00000028982 (Ensembl)
rat Sun5 296289 (Entrez Gene)
Chr3 q41 NP_001100000 (RefSeq)
NM_001106530 (RefSeq)
chimpanzee SUN5 469915 (Entrez Gene)
Chr20 XP_016793192 (RefSeq)
cattle SUN5 514087 (Entrez Gene)
Chr13 NP_001039630 (RefSeq)
NM_001046165 (RefSeq)
dog SUN5 485833 (Entrez Gene)
Chr24 XP_013962372 (RefSeq)
macaque, rhesus SUN5 710995 (Entrez Gene)
Chr10 XP_015004691 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/12/2019
MGI 6.13
The Jackson Laboratory