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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
12556

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SCARA5 HGNC:28701 (HGNC)
286133 (Entrez Gene)
611306 (OMIM)
HGNC homology
Chr8 p21.1 Chr8:27869882-27992852 (-)
GRCh38.p7
Q6ZMJ2 (UniProt | EBI)
NM_173833 (RefSeq)
mouse Scara5 MGI:1918395 (MGI)
71145 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr14 34.35 cM Chr14:65666403-65764826 (+)
GRCm38
71145 (NCBI Gene Model)
Q8K299 (UniProt | EBI)
NM_028903 (RefSeq)
rat Scara5 305974 (Entrez Gene)
Chr15 p11 NP_001129327 (RefSeq)
NM_001135855 (RefSeq)
chimpanzee SCARA5 464079 (Entrez Gene)
Chr8 XP_024200867 (RefSeq)
cattle SCARA5 516087 (Entrez Gene)
Chr8 A5PJQ2 (UniProt | EBI)
NM_001102499 (RefSeq)
dog SCARA5 486097 (Entrez Gene)
Chr25 XP_543223 (RefSeq)
chicken SCARA5 771061 (Entrez Gene)
Chr3 XP_025004894 (RefSeq)
zebrafish scara5 564500 (Entrez Gene)
Chr20 Q5RFW0 (UniProt | EBI)
NM_001030190 (RefSeq)
frog, western clawed scara5 100497349 (Entrez Gene)
Chr5 XP_002941495 (RefSeq)
macaque, rhesus SCARA5 713377 (Entrez Gene)
Chr8 XP_015000529 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/12/2019
MGI 6.14
The Jackson Laboratory