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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
12542

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human STK40 HGNC:21373 (HGNC)
83931 (Entrez Gene)
609437 (OMIM)
STK40 (MyGene.info)
HGNC homology
Chr1 p34.3 Chr1:36339619-36385927 (-)
GRCh38.p7
Q8N2I9 (UniProt | EBI)
NM_001282546 (RefSeq)
mouse Stk40 MGI:1921428 (MGI)
74178 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr4 59.89 cM Chr4:126103957-126141029 (+)
GRCm38
ENSMUSG00000042608 (Ensembl Gene Model)
ENSMUSP00000111990 (Ensembl)
ENSMUST00000116286 (Ensembl)
rat Stk40 360230 (Entrez Gene)
Chr5 q36 Q7TNL4 (UniProt | EBI)
NM_183056 (RefSeq)
chimpanzee STK40 456753 (Entrez Gene)
Chr1
cattle STK40 515723 (Entrez Gene)
Chr3 Q17QV9 (UniProt | EBI)
NM_001075727 (RefSeq)
dog STK40 482475 (Entrez Gene)
Chr15 XP_038477697 (RefSeq)
chicken STK40 395120 (Entrez Gene)
Chr23 Q7T0B1 (UniProt | EBI)
NM_204466 (RefSeq)
zebrafish stk40 564859 (Entrez Gene)
Chr16 XP_693275 (RefSeq)
frog, western clawed stk40 100145549 (Entrez Gene)
Chr2 Q7T0B0 (UniProt | EBI)
NM_001126983 (RefSeq)
macaque, rhesus STK40 713214 (Entrez Gene)
Chr1 XP_014990940 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
04/06/2021
MGI 6.16
The Jackson Laboratory