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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
12490

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CAVIN3 HGNC:9400 (HGNC)
112464 (Entrez Gene)
618303 (OMIM)
HGNC homology
Chr11 p15.4 Chr11:6318946-6320510 (-)
GRCh38.p7
Q969G5 (UniProt | EBI)
NM_145040 (RefSeq)
mouse Cavin3 MGI:1923422 (MGI)
109042 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr7 55.87 cM Chr7:105480616-105482197 (-)
GRCm38
109042 (NCBI Gene Model)
Q91VJ2 (UniProt | EBI)
NM_028444 (RefSeq)
rat Cavin3 85332 (Entrez Gene)
Chr1 q32 Q9Z1H9 (UniProt | EBI)
NM_134449 (RefSeq)
chimpanzee CAVIN3 450988 (Entrez Gene)
Chr11 XP_001164205 (RefSeq)
cattle CAVIN3 510203 (Entrez Gene)
Chr15 A4FV37 (UniProt | EBI)
NM_001083401 (RefSeq)
dog CAVIN3 476831 (Entrez Gene)
Chr21 XP_534035 (RefSeq)
macaque, rhesus CAVIN3 712799 (Entrez Gene)
Chr14 XP_002808124 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
05/14/2019
MGI 6.14
The Jackson Laboratory