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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
12485

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SETD5 HGNC:25566 (HGNC)
55209 (Entrez Gene)
615743 (OMIM)
SETD5 (gene) (MyGene.info)
HGNC homology
Chr3 p25.3 Chr3:9397700-9478154 (+)
GRCh38.p7
autosomal dominant non-syndromic intellectual disability 23
Q9C0A6 (UniProt | EBI)
NM_001080517 (RefSeq)
mouse Setd5 MGI:1920145 (MGI)
72895 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr6 52.73 cM Chr6:113077365-113153435 (+)
GRCm38
ENSMUSG00000034269 (Ensembl Gene Model)
ENSMUSP00000108780 (Ensembl)
ENSMUST00000113155 (Ensembl)
rat Setd5 297514 (Entrez Gene)
Chr4 q42 NP_001100084 (RefSeq)
NM_001106614 (RefSeq)
chimpanzee SETD5 460148 (Entrez Gene)
Chr3 XP_016795862 (RefSeq)
cattle SETD5 532578 (Entrez Gene)
Chr22 NP_001192934 (RefSeq)
NM_001206005 (RefSeq)
dog SETD5 100856259 (Entrez Gene)
Chr20 XP_022262121 (RefSeq)
chicken SETD5 416046 (Entrez Gene)
Chr12 NP_001264946 (RefSeq)
NM_001257264 (RefSeq)
zebrafish setd5 570278 (Entrez Gene)
Chr6 XP_021332760 (RefSeq)
frog, western clawed setd5 100145036 (Entrez Gene)
Chr4 XP_002938435 (RefSeq)
macaque, rhesus SETD5 704174 (Entrez Gene)
Chr2 NP_001252907 (RefSeq)
NM_001265978 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory