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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1241

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human APEX1 HGNC:587 (HGNC)
328 (Entrez Gene)
107748 (OMIM)
APEX1 (MyGene.info)
HGNC homology
Chr14 q11.2 Chr14:20455131-20457772 (+)
GRCh38.p7
P27695 (UniProt | EBI)
NM_080649 (RefSeq)
mouse Apex1 MGI:88042 (MGI)
11792 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr14 26.3 cM Chr14:50924968-50927139 (+)
GRCm38
ENSMUSG00000035960 (Ensembl Gene Model)
ENSMUSP00000042602 (Ensembl)
ENSMUST00000049411 (Ensembl)
rat Apex1 79116 (Entrez Gene)
Chr15 p14 P43138 (UniProt | EBI)
NM_024148 (RefSeq)
chimpanzee APEX1 465200 (Entrez Gene)
Chr14 A2T6Y4 (UniProt | EBI)
NM_001081485 (RefSeq)
cattle APEX1 281630 (Entrez Gene)
Chr10 P23196 (UniProt | EBI)
NM_176609 (RefSeq)
dog APEX1 482558 (Entrez Gene)
Chr15 NP_001138591 (RefSeq)
NM_001145119 (RefSeq)
chicken APEX1 100431102 (Entrez Gene)
ChrUN NP_001171688 (RefSeq)
NM_001184759 (RefSeq)
zebrafish apex1 406730 (Entrez Gene)
Chr4 A0MTA1 (UniProt | EBI)
NM_001328578 (RefSeq)
frog, western clawed apex1 394929 (Entrez Gene)
Chr1 NP_989307 (RefSeq)
NM_203976 (RefSeq)
macaque, rhesus APEX1 702757 (Entrez Gene)
Chr7 NP_001245038 (RefSeq)
NM_001258109 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/12/2019
MGI 6.14
The Jackson Laboratory