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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
12324

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC52A3 HGNC:16187 (HGNC)
113278 (Entrez Gene)
613350 (OMIM)
Chr20 p13 Chr20:760080-776015 (-)
GRCh38
Brown-Vialetto-Van Laere Syndrome 1; BVVLS1
Fazio-Londe Disease
Q9NQ40 (UniProt | EBI)
NM_033409 (RefSeq)
mouse Slc52a3 MGI:1916948 (MGI)
69698 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 74.83 cM Chr2:151996535-152009258 (+)
GRCm38
OTTMUSG00000015850 (VEGA)
OTTMUSP00000016892 (VEGA)
OTTMUST00000037669 (VEGA)
rat Slc52a3 311536 (Entrez Gene)
Chr3 q41 Q4FZU9 (UniProt | EBI)
NM_001037198 (RefSeq)
chimpanzee SLC52A3 458028 (Entrez Gene)
Chr20 XP_514458 (RefSeq)
rhesus macaque C20orf54 715057 (Entrez Gene)
Chr10 NP_001181490 (RefSeq)
NM_001194561 (RefSeq)
cattle SLC52A3 507459 (Entrez Gene)
Chr13 Q5E9R1 (UniProt | EBI)
NM_001014864 (RefSeq)
dog SLC52A3 100856604 (Entrez Gene)
Chr24 XP_003639889 (RefSeq)
chicken SLC52A3 419270 (Entrez Gene)
Chr20 XP_417443 (RefSeq)
western clawed frog LOC100486825 100486825 (Entrez Gene)
ChrUN XP_002944475 (RefSeq)
zebrafish slc52a3 678609 (Entrez Gene)
Chr8 B0S5Y3 (UniProt | EBI)
NM_001040357 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory