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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
12253

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human IFT80 HGNC:29262 (HGNC)
57560 (Entrez Gene)
611177 (OMIM)
Chr3 q25.33 Chr3:160256986-160399532 (-)
GRCh38
Short-Rib Thoracic Dysplasia 2 with or without Polydactyly; SRTD2
Q9P2H3 (UniProt | EBI)
NM_020800 (RefSeq)
mouse Ift80 MGI:1915509 (MGI)
68259 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 32.07 cM Chr3:68892499-69004559 (-)
GRCm38
Short-Rib Thoracic Dysplasia 2 with or without Polydactyly; SRTD2
Short-Rib Thoracic Dysplasia 3 with or without Polydactyly; SRTD3
OTTMUSG00000024494 (VEGA)
OTTMUSP00000029301 (VEGA)
OTTMUST00000060100 (VEGA)
rat Ift80 295106 (Entrez Gene)
Chr2 q31 Q66HB3 (UniProt | EBI)
NM_001013911 (RefSeq)
chimpanzee IFT80 460819 (Entrez Gene)
Chr3 NP_001266843 (RefSeq)
NM_001279914 (RefSeq)
rhesus macaque IFT80 705146 (Entrez Gene)
Chr2 XP_001093524 (RefSeq)
cattle IFT80 513583 (Entrez Gene)
Chr1 NP_001092429 (RefSeq)
NM_001098959 (RefSeq)
dog IFT80 488132 (Entrez Gene)
Chr34 XP_545256 (RefSeq)
chicken IFT80 425014 (Entrez Gene)
Chr9 XP_422817 (RefSeq)
zebrafish ift80 494082 (Entrez Gene)
Chr15 NP_001008625 (RefSeq)
NM_001008625 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory