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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
121565

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TPH1 HGNC:12008 (HGNC)
7166 (Entrez Gene)
191060 (OMIM)
TPH1 (MyGene.info)
HGNC homology
Chr11 p15.1 Chr11:18020537-18040788 (-)
GRCh38.p7
P17752 (UniProt | EBI)
NM_004179 (RefSeq)
mouse Tph1 MGI:98796 (MGI)
21990 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr7 30.43 cM Chr7:46644641-46672537 (-)
GRCm38
21990 (NCBI Gene Model)
P17532 (UniProt | EBI)
NM_009414 (RefSeq)
rat Tph1 24848 (Entrez Gene)
Chr1 q22 P09810 (UniProt | EBI)
NM_001100634 (RefSeq)
chimpanzee TPH1 466453 (Entrez Gene)
Chr11 XP_016776021 (RefSeq)
cattle TPH1 781941 (Entrez Gene)
Chr15 XP_005216134 (RefSeq)
dog TPH1 611956 (Entrez Gene)
Chr21 NP_001184120 (RefSeq)
NM_001197191 (RefSeq)
chicken TPH1 395799 (Entrez Gene)
Chr5 P70080 (UniProt | EBI)
NM_204956 (RefSeq)
zebrafish tph1a 352943 (Entrez Gene)
Chr25 NP_840091 (RefSeq)
NM_178306 (RefSeq)
tph1b 415103 (Entrez Gene)
Chr7 NP_001001843 (RefSeq)
NM_001001843 (RefSeq)
frog, western clawed tph1 100497239 (Entrez Gene)
ChrUN XP_012809950 (RefSeq)
macaque, rhesus TPH1 695363 (Entrez Gene)
Chr14 XP_014970183 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/12/2019
MGI 6.14
The Jackson Laboratory