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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
12149

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CCDC39 HGNC:25244 (HGNC)
339829 (Entrez Gene)
613798 (OMIM)
Chr3 q26.33 Chr3:180614008-180679495 (-)
GRCh38
Ciliary Dyskinesia, Primary, 14; CILD14
Q9UFE4 (UniProt | EBI)
NM_181426 (RefSeq)
mouse Ccdc39 MGI:1289263 (MGI)
51938 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 16.32 cM Chr3:33812362-33844310 (-)
GRCm38
Ciliary Dyskinesia, Primary, 14; CILD14
OTTMUSG00000026483 (VEGA)
OTTMUSP00000032639 (VEGA)
OTTMUST00000065474 (VEGA)
rat Ccdc39 310315 (Entrez Gene)
Chr2 q25 D3Z8K2 (UniProt | EBI)
NM_001107667 (RefSeq)
chimpanzee CCDC39 100615284 (Entrez Gene)
Chr3 XP_003310174 (RefSeq)
cattle CCDC39 534432 (Entrez Gene)
Chr1 E1BM70 (UniProt | EBI)
NM_001206056 (RefSeq)
dog CCDC39 488089 (Entrez Gene)
Chr34 XP_545213 (RefSeq)
chicken CCDC39 424969 (Entrez Gene)
Chr9 XP_422777 (RefSeq)
western clawed frog ccdc39 779795 (Entrez Gene)
ChrUN Q0V9R4 (UniProt | EBI)
NM_001078874 (RefSeq)
zebrafish ccdc39 555319 (Entrez Gene)
Chr2 P0CK98 (UniProt | EBI)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory