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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
120934

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PRTN3 HGNC:9495 (HGNC)
5657 (Entrez Gene)
177020 (OMIM)
Chr19 p13.3 Chr19:840985-848175 (+)
GRCh38
P24158 (UniProt | EBI)
NM_002777 (RefSeq)
mouse Prtn3 MGI:893580 (MGI)
19152 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 39.72 cM Chr10:79874476-79883174 (+)
GRCm38
OTTMUSG00000035169 (VEGA)
OTTMUSP00000048978 (VEGA)
OTTMUST00000089581 (VEGA)
rat Prtn3 314615 (Entrez Gene)
Chr7 q11 NP_001019435 (RefSeq)
NM_001024264 (RefSeq)
rhesus macaque LOC721131 721131 (Entrez Gene)
Chr19 XP_001117176 (RefSeq)
cattle PRTN3 100298591 (Entrez Gene)
Chr7 XP_002689189 (RefSeq)
western clawed frog prtn3 448597 (Entrez Gene)
ChrUN NP_001006847 (RefSeq)
NM_001006846 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory