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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
120261

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RTL1 HGNC:14665 (HGNC)
388015 (Entrez Gene)
611896 (OMIM)
HGNC homology
Chr14 q32.2-q32.31 Chr14:100880655-100884847 (-)
GRCh38.p7
A6NKG5 (UniProt | EBI)
NM_001134888 (RefSeq)
mouse Rtl1 MGI:2656842 (MGI)
353326 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr12 60.38 cM Chr12:109589193-109600330 (-)
GRCm38
ENSMUSG00000085925 (Ensembl Gene Model)
ENSMUSP00000115957 (Ensembl)
ENSMUST00000149046 (Ensembl)
chimpanzee RTL1 465395 (Entrez Gene)
Chr14 XP_520846 (RefSeq)
cattle RTL1 606737 (Entrez Gene)
Chr21 Q52QI2 (UniProt | EBI)
NM_001195020 (RefSeq)
dog RTL1 100856720 (Entrez Gene)
Chr8 XP_038401670 (RefSeq)
macaque, rhesus RTL1 718079 (Entrez Gene)
Chr7 XP_001110319 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
02/16/2021
MGI 6.16
The Jackson Laboratory