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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11937

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TMEM54 HGNC:24143 (HGNC)
113452 (Entrez Gene)
HGNC homology
Chr1 p35.1 Chr1:32894595-32901435 (-)
GRCh38.p7
Q969K7 (UniProt | EBI)
NM_001329724 (RefSeq)
mouse Tmem54 MGI:1913510 (MGI)
66260 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr4 62.86 cM Chr4:129105548-129111626 (+)
GRCm38
ENSMUSG00000028786 (Ensembl Gene Model)
ENSMUSP00000101679 (Ensembl)
ENSMUST00000106064 (Ensembl)
rat Tmem54 362605 (Entrez Gene)
Chr5 q36 Q494T4 (UniProt | EBI)
NM_001034151 (RefSeq)
chimpanzee TMEM54 100612077 (Entrez Gene)
Chr1 XP_016814064 (RefSeq)
cattle TMEM54 509773 (Entrez Gene)
Chr2 Q3ZCD2 (UniProt | EBI)
NM_001034364 (RefSeq)
dog TMEM54 611785 (Entrez Gene)
Chr2 XP_038451329 (RefSeq)
frog, western clawed tmem54 100485545 (Entrez Gene)
Chr2 XP_002940070 (RefSeq)
macaque, rhesus TMEM54 710342 (Entrez Gene)
Chr1 XP_014990090 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
03/30/2021
MGI 6.16
The Jackson Laboratory