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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11936

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human NICN1 HGNC:18317 (HGNC)
84276 (Entrez Gene)
611516 (OMIM)
HGNC homology
Chr3 p21.31 Chr3:49422333-49429324 (-)
GRCh38.p7
Q9BSH3 (UniProt | EBI)
NM_032316 (RefSeq)
mouse Nicn1 MGI:1913507 (MGI)
66257 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr9 59.18 cM Chr9:108290429-108296498 (+)
GRCm38
OTTMUSG00000050750 (VEGA)
OTTMUSP00000069167 (VEGA)
OTTMUST00000128619 (VEGA)
rat Nicn1 619581 (Entrez Gene)
Chr8 NP_001030171 (RefSeq)
NM_001034999 (RefSeq)
chimpanzee NICN1 460370 (Entrez Gene)
Chr3 XP_009443767 (RefSeq)
cattle NICN1 614730 (Entrez Gene)
Chr22 NP_001029939 (RefSeq)
NM_001034767 (RefSeq)
dog NICN1 608810 (Entrez Gene)
Chr20 Q861Y6 (UniProt | EBI)
NM_001033995 (RefSeq)
zebrafish nicn1 445216 (Entrez Gene)
Chr22 NP_001003610 (RefSeq)
NM_001003610 (RefSeq)
frog, western clawed mst1r 493453 (Entrez Gene)
Chr4 NP_001008091 (RefSeq)
NM_001008090 (RefSeq)
macaque, rhesus NICN1 706399 (Entrez Gene)
Chr2 NP_001247874 (RefSeq)
NM_001260945 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/14/2017
MGI 6.11
The Jackson Laboratory