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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11849

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ALPK1 HGNC:20917 (HGNC)
80216 (Entrez Gene)
607347 (OMIM)
ALPK1 (MyGene.info)
HGNC homology
Chr4 q25 Chr4:112286420-112442618 (+)
GRCh38.p7
Q96QP1 (UniProt | EBI)
NM_001253884 (RefSeq)
mouse Alpk1 MGI:1918731 (MGI)
71481 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr3 56.54 cM Chr3:127670310-127780527 (-)
GRCm38
ENSMUSG00000028028 (Ensembl Gene Model)
ENSMUSP00000029662 (Ensembl)
ENSMUST00000029662 (Ensembl)
rat Alpk1 310879 (Entrez Gene)
Chr2 q42 XP_017452380 (RefSeq)
chimpanzee ALPK1 471280 (Entrez Gene)
Chr4 XP_016807525 (RefSeq)
cattle ALPK1 524375 (Entrez Gene)
Chr6 XP_010804225 (RefSeq)
dog ALPK1 487906 (Entrez Gene)
Chr32 XP_022269277 (RefSeq)
chicken ALPK1 100858173 (Entrez Gene)
Chr4 XP_025006269 (RefSeq)
frog, western clawed alpk1 100036729 (Entrez Gene)
Chr1 NP_001090743 (RefSeq)
NM_001097274 (RefSeq)
macaque, rhesus ALPK1 700993 (Entrez Gene)
Chr5 XP_014994534 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
03/19/2019
MGI 6.13
The Jackson Laboratory