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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ALPK1 HGNC:20917 (HGNC)
80216 (Entrez Gene)
607347 (OMIM)
ALPK1 (MyGene.info)
HGNC homology
Chr4 q25 Chr4:112286420-112442618 (+)
Q96QP1 (UniProt | EBI)
NM_001253884 (RefSeq)
mouse Alpk1 MGI:1918731 (MGI)
71481 (Entrez Gene)
Gene Tree
HGNC homology
Chr3 56.54 cM Chr3:127670310-127780527 (-)
ENSMUSG00000028028 (Ensembl Gene Model)
ENSMUSP00000143223 (Ensembl)
ENSMUST00000198955 (Ensembl)
rat Alpk1 310879 (Entrez Gene)
Chr2 q42 XP_001076258 (RefSeq)
chimpanzee ALPK1 471280 (Entrez Gene)
Chr4 XP_016807525 (RefSeq)
cattle ALPK1 524375 (Entrez Gene)
Chr6 XP_015326998 (RefSeq)
dog ALPK1 487906 (Entrez Gene)
Chr32 XP_022269284 (RefSeq)
chicken ALPK1 100858173 (Entrez Gene)
Chr4 XP_015131823 (RefSeq)
frog, western clawed alpk1 100036729 (Entrez Gene)
Chr1 NP_001090743 (RefSeq)
NM_001097274 (RefSeq)
macaque, rhesus ALPK1 700993 (Entrez Gene)
Chr5 XP_014994531 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.14
The Jackson Laboratory