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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1171

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HIF1A HGNC:4910 (HGNC)
3091 (Entrez Gene)
603348 (OMIM)
Chr14 q23.2 Chr14:61695401-61748259 (+)
GRCh38
Q16665 (UniProt | EBI)
NM_001530 (RefSeq)
mouse Hif1a MGI:106918 (MGI)
15251 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 31.99 cM Chr12:73901375-73947530 (+)
GRCm38
Glycogen Storage Disease V; GSD5
Glycogen Storage Disease VII; GSD7
Von Hippel-Lindau Syndrome; VHL
OTTMUSG00000019740 (VEGA)
OTTMUSP00000021321 (VEGA)
OTTMUST00000047239 (VEGA)
rat Hif1a 29560 (Entrez Gene)
Chr6 q24 O35800 (UniProt | EBI)
NM_024359 (RefSeq)
chimpanzee HIF1A 746195 (Entrez Gene)
Chr14 XP_001168948 (RefSeq)
rhesus macaque HIF1A 704678 (Entrez Gene)
Chr7 XP_001098939 (RefSeq)
cattle HIF1A 281814 (Entrez Gene)
Chr10 Q9XTA5 (UniProt | EBI)
NM_174339 (RefSeq)
dog HIF1A 480348 (Entrez Gene)
Chr8 NP_001274092 (RefSeq)
NM_001287163 (RefSeq)
chicken HIF1A 374177 (Entrez Gene)
Chr5 Q9YIB9 (UniProt | EBI)
NM_204297 (RefSeq)
zebrafish hif1ab 393202 (Entrez Gene)
Chr20 NP_956527 (RefSeq)
NM_200233 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory