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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11678

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CCDC82 HGNC:26282 (HGNC)
79780 (Entrez Gene)
Template:PBB/79780 (MyGene.info)
HGNC homology
Chr11 q21 Chr11:96352765-96389940 (-)
GRCh38.p7
Q8N4S0 (UniProt | EBI)
NM_001318737 (RefSeq)
mouse Ccdc82 MGI:1913646 (MGI)
66396 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr9 Syntenic Chr9:13246955-13292520 (+)
GRCm38
ENSMUSG00000079084 (Ensembl Gene Model)
ENSMUSP00000150947 (Ensembl)
ENSMUST00000217444 (Ensembl)
rat Ccdc82 300359 (Entrez Gene)
Chr8 q11 Q66H73 (UniProt | EBI)
NM_001007660 (RefSeq)
chimpanzee CCDC82 739228 (Entrez Gene)
Chr11 NP_001267245 (RefSeq)
NM_001280316 (RefSeq)
cattle CCDC82 511627 (Entrez Gene)
Chr15 NP_001039559 (RefSeq)
NM_001046094 (RefSeq)
dog CCDC82 485114 (Entrez Gene)
Chr21 XP_005633372 (RefSeq)
chicken CCDC82 426136 (Entrez Gene)
Chr1 XP_025002657 (RefSeq)
frog, western clawed ccdc82 100145117 (Entrez Gene)
Chr2 XP_017947238 (RefSeq)
macaque, rhesus CCDC82 700198 (Entrez Gene)
Chr14 XP_014971000 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory