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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11637

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GALNT12 HGNC:19877 (HGNC)
79695 (Entrez Gene)
610290 (OMIM)
Chr9 q22.33 Chr9:98807699-98850081 (+)
GRCh38
Colorectal Cancer, Susceptibility to, 1; CRCS1
Q8IXK2 (UniProt | EBI)
NM_024642 (RefSeq)
mouse Galnt12 MGI:2444664 (MGI)
230145 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 25.96 cM Chr4:47091909-47123070 (+)
GRCm38
OTTMUSG00000006777 (VEGA)
OTTMUSP00000007178 (VEGA)
OTTMUST00000015587 (VEGA)
rat Galnt12 313233 (Entrez Gene)
Chr5 q22 XP_001066416 (RefSeq)
chimpanzee GALNT12 747531 (Entrez Gene)
Chr9 XP_001157326 (RefSeq)
rhesus macaque GALNT12 715128 (Entrez Gene)
Chr15 NP_001181506 (RefSeq)
NM_001194577 (RefSeq)
cattle GALNT12 508488 (Entrez Gene)
Chr8 NP_001093795 (RefSeq)
NM_001100325 (RefSeq)
dog GALNT12 474777 (Entrez Gene)
Chr11 XP_532008 (RefSeq)
chicken GALNT12 420978 (Entrez Gene)
Chr2 XP_419065 (RefSeq)
western clawed frog galnt12 100485011 (Entrez Gene)
ChrUN XP_002935181 (RefSeq)
zebrafish galnt12 559736 (Entrez Gene)
Chr19 XP_688194 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory