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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11628

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC12A8 HGNC:15595 (HGNC)
84561 (Entrez Gene)
611316 (OMIM)
Chr3 q21.2 Chr3:125082636-125212765 (-)
GRCh38
A0AV02 (UniProt | EBI)
NM_024628 (RefSeq)
mouse Slc12a8 MGI:2443672 (MGI)
171286 (Entrez Gene)
Gene Tree
VISTA-Point
Chr16 24.12 cM Chr16:33517328-33664135 (+)
GRCm38
OTTMUSG00000027311 (VEGA)
OTTMUSP00000033981 (VEGA)
OTTMUST00000067507 (VEGA)
rat Slc12a8 266733 (Entrez Gene)
Chr11 q22 Q8CJI3 (UniProt | EBI)
NM_153625 (RefSeq)
chimpanzee SLC12A8 460649 (Entrez Gene)
Chr3 XP_516709 (RefSeq)
rhesus macaque SLC12A8 716531 (Entrez Gene)
Chr2 XP_002802725 (RefSeq)
cattle SLC12A8 521454 (Entrez Gene)
Chr1 XP_599718 (RefSeq)
dog SLC12A8 488016 (Entrez Gene)
Chr33 XP_005639642 (RefSeq)
chicken SLC12A8 424258 (Entrez Gene)
Chr7 XP_003641672 (RefSeq)
zebrafish slc12a8 100000006 (Entrez Gene)
Chr9 NP_001121749 (RefSeq)
NM_001128277 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory