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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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mouse Calm1 MGI:88251 (MGI)
12313 (Entrez Gene)
Gene Tree
HGNC homology
Chr12 50.43 cM Chr12:100199435-100209814 (+)
ENSMUSG00000001175 (Ensembl Gene Model)
ENSMUSP00000158788 (Ensembl)
ENSMUST00000238462 (Ensembl)
Calm2 MGI:103250 (MGI)
12314 (Entrez Gene)
Gene Tree
HGNC homology
Chr17 57.49 cM Chr17:87433412-87446935 (-)
ENSMUSG00000036438 (Ensembl Gene Model)
ENSMUSP00000048857 (Ensembl)
ENSMUST00000040440 (Ensembl)
Calm3 MGI:103249 (MGI)
12315 (Entrez Gene)
Gene Tree
HGNC homology
Chr7 9.15 cM Chr7:16915379-16924032 (-)
12315 (NCBI Gene Model)
P0DP28 (UniProt | EBI)
NM_007590 (RefSeq)
rat Calm1 24242 (Entrez Gene)
Chr6 q32 P0DP29 (UniProt | EBI)
NM_031969 (RefSeq)
Calm2 50663 (Entrez Gene)
Chr6 q12 P0DP30 (UniProt | EBI)
NM_017326 (RefSeq)
Calm3 24244 (Entrez Gene)
Chr1 q21 P0DP31 (UniProt | EBI)
NM_012518 (RefSeq)
chimpanzee CALM1 738819 (Entrez Gene)
Chr14 NP_001104289 (RefSeq)
NM_001110819 (RefSeq)
cattle CALM1 617095 (Entrez Gene)
Chr10 NP_001229501 (RefSeq)
NM_001242572 (RefSeq)
CALM2 100297344 (Entrez Gene)
Chr11 NP_001229516 (RefSeq)
NM_001242587 (RefSeq)
CALM3 520277 (Entrez Gene)
Chr18 NP_001039714 (RefSeq)
NM_001046249 (RefSeq)
dog CALM1 480416 (Entrez Gene)
Chr8 XP_537537 (RefSeq)
CALM2 474584 (Entrez Gene)
Chr10 XP_864645 (RefSeq)
CALM3 476428 (Entrez Gene)
Chr1 XP_022280413 (RefSeq)
chicken CALM2 395855 (Entrez Gene)
Chr3 P62149 (UniProt | EBI)
NM_205005 (RefSeq)
zebrafish calm1a 406660 (Entrez Gene)
Chr17 NP_998516 (RefSeq)
NM_213351 (RefSeq)
calm1b 368217 (Entrez Gene)
Chr20 NP_956376 (RefSeq)
NM_200082 (RefSeq)
calm2a 336121 (Entrez Gene)
Chr13 NP_956290 (RefSeq)
NM_199996 (RefSeq)
calm2b 192322 (Entrez Gene)
Chr12 NP_999901 (RefSeq)
NM_214736 (RefSeq)
calm3a 327379 (Entrez Gene)
Chr15 NP_892012 (RefSeq)
NM_182967 (RefSeq)
calm3b 321808 (Entrez Gene)
Chr21 NP_955864 (RefSeq)
NM_199570 (RefSeq)
frog, western clawed calm1 100496298 (Entrez Gene)
Chr5 XP_012819336 (RefSeq)
calm2 493522 (Entrez Gene)
Chr8 NP_001008160 (RefSeq)
NM_001008159 (RefSeq)
macaque, rhesus LOC706351 706351 (Entrez Gene)
Chr8 XP_028708592 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.14
The Jackson Laboratory