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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
114328

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PRRT2 HGNC:30500 (HGNC)
112476 (Entrez Gene)
614386 (OMIM)
Chr16 p11.2 Chr16:29812088-29815881 (+)
GRCh38
Convulsions, Familial Infantile, with Paroxysmal Choreoathetosis;
Episodic Kinesigenic Dyskinesia 1; EKD1
Seizures, Benign Familial Infantile, 2; BFIS2
Q7Z6L0 (UniProt | EBI)
NM_145239 (RefSeq)
mouse Prrt2 MGI:1916267 (MGI)
69017 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 69.28 cM Chr7:127016771-127021211 (-)
GRCm38
OTTMUSG00000033189 (VEGA)
OTTMUSP00000044573 (VEGA)
OTTMUST00000083061 (VEGA)
rat Prrt2 361651 (Entrez Gene)
Chr1 q36 D3ZFB6 (UniProt | EBI)
NM_001276470 (RefSeq)
chimpanzee PRRT2 738350 (Entrez Gene)
Chr16 XP_003315093 (RefSeq)
dog PRRT2 100686783 (Entrez Gene)
Chr6 XP_003434852 (RefSeq)
zebrafish si:ch211-149k17.5 100329612 (Entrez Gene)
Chr12 XP_002663950 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory